JavaScript package for predictive data analysis and machine learning

Related tags

Learning resource scikit.js
Overview

scikit.js

JavaScript package for predictive data analysis and machine learning. Generic math operations are powered by Tensorflowjs core layer.

We are modeling the Scikit.js API after the original Scikit-learn Python library.

Contributing Guide

See guide here

Documentation

TODO

Comments
  • SGD implementations of LinearRegression / Ridge / Lasso / ElasicNet

    SGD implementations of LinearRegression / Ridge / Lasso / ElasicNet

    Here's a first pass at LinearRegression in scikit.js.

    First some notes on how I'm approaching this.

    1. Obviously we are keeping the signature as close to scikit-learn as possible.

    I've done all of the methods except for "score". I've also added a function called "importModel" which does the "importing from python" that we talked about in the discussion here.

    The LinearRegression in Scikit-Learn doesn't use gradient descent (like this one). It uses some production level linalg solvers. Eventually in the long run, we should do the same thing. This is a holdover until we get some better / faster code in here.

    2. I think it's probably wise to use get/set methods to match the Scikit-Learn Api

    For LinearRegression in sklearn, you can just go lr.coef_ and lr.intercept_ to get those values. We store the internal model as tf.sequential, so it makes sense to basically use getters/setters to not break the contract.

    3. I'm not sure what our plan is with prettier.js?

    Currently I'm operating off of the .prettier file in the repo, but some of the code in the repo is ignoring that. Moreover, my personal preference is indentation is 2, and no semi-colons. Though, I don't really care that much. I more just wanna make sure we are all on the same page, and that it runs semi-automatically in the repo.

    4. I've never used JSDoc before but it seems great.

    I'm gonna add it in my next pass. Just wanted to get this PR in before I go to bed. I also plan on adding a lot more tests.

    5. I drunkenly asked my buddy to make a logo for scikit.js.

    I've attached it. If ya like it, we can start there. Otherwise, we can make something else.

    Screen Shot 2021-09-29 at 10 25 51 PM

    I've attached a png screenshot only because Github complains when I try to put in an svg :)

    opened by dcrescim 6
  • feat: cross-val-score and k-fold implemented

    feat: cross-val-score and k-fold implemented

    Cross validation is not just crucial to machine learning itself. It is also useful to validate machine learning model implementations. This PR aims to add support for basic k-fold cross validation.

    opened by DirkToewe 5
  • Renamed filenames to be snakecase

    Renamed filenames to be snakecase

    As per @Lewuathe's suggestions changed our filenames to be snakecase everywhere. I agree that it's better because everything else in this repo is already snakeCase ("fitPredict", "trainTestSplit", etc...).

    3 major things:

    1. Renamed all files to snakeCase -> "logistic.regression.ts" -> "logisticRegression.ts"
    2. Fixed up Contributing Doc to match
    3. Removed all references to opensource9ja in favor of javascriptdata (we changed the org name, thanks @risenW)
    opened by dcrescim 5
  • KNeighborsRegressor

    KNeighborsRegressor

    Build a KNeighborsRegressor which matches the sklearn API.

    https://scikit-learn.org/stable/modules/generated/sklearn.neighbors.KNeighborsRegressor.html#sklearn.neighbors.KNeighborsRegressor

    Technically there are 3 different strategies ‘ball_tree’, ‘kd_tree’, ‘brute’. This issue is only to support the "brute" method which checks the distance between the predicted point with every point in the input.

    The other two are optimizations which try to use trees (kd_tree), and spheres(ball_tree) to speed up this algo, but to start let's just do brute.

    enhancement 
    opened by dcrescim 5
  • yarn add scikitjs fail

    yarn add scikitjs fail

    Steps to reproduce the behavior:

    1. Create dir \scikitjs
    2. Init npm dir "npm init"
    3. Add module: yarn add scikitjs
    4. error: ..... error D:\reactapp\personal\scikitjs\node_modules\scikitjs: Command failed. Exit code: 1 Command: (cd docs && npm install && cd ..); (npx husky install); ....

    Desktop:

    • OS: Windows 10
    • Node version: v14.18.1

    Cattura

    opened by condorman 3
  • A thought experiment with Cog

    A thought experiment with Cog

    Cog is a tool that allows one to embed python code into other files. See https://nedbatchelder.com/code/cog

    What if we could use cog to run the python models, generate the data / scores, and test that we get similar results? I've attached an example below in this PR.

    In the example below, the data is generated in python, and a LinearRegression is trained in python. Then we save the data, and score variables in this case to the javascript file. From there we execute our LinearRegression and make sure we get a similar score.

    opened by dcrescim 3
  • Model saving and loading

    Model saving and loading

    Is your feature request related to a problem? Please describe. How are models plan to be save and loaded

    Describe the solution you'd like I think we can have a fromJson and toJson to save and load model params and weight. if this is needed i can start working on that

    Describe alternatives you've considered A clear and concise description of any alternative solutions or features you've considered.

    Additional context Add any other context or screenshots about the feature request here.

    enhancement 
    opened by steveoni 3
  • chore(deps): bump loader-utils from 1.4.0 to 1.4.1 in /docs

    chore(deps): bump loader-utils from 1.4.0 to 1.4.1 in /docs

    Bumps loader-utils from 1.4.0 to 1.4.1.

    Release notes

    Sourced from loader-utils's releases.

    v1.4.1

    1.4.1 (2022-11-07)

    Bug Fixes

    Changelog

    Sourced from loader-utils's changelog.

    1.4.1 (2022-11-07)

    Bug Fixes

    Commits

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    dependencies 
    opened by dependabot[bot] 2
  • chore(deps): bump cross-fetch from 3.1.4 to 3.1.5 in /docs

    chore(deps): bump cross-fetch from 3.1.4 to 3.1.5 in /docs

    Bumps cross-fetch from 3.1.4 to 3.1.5.

    Release notes

    Sourced from cross-fetch's releases.

    v3.1.5

    What's Changed

    New Contributors

    Full Changelog: https://github.com/lquixada/cross-fetch/compare/v3.1.4...v3.1.5

    Commits
    • c6089df chore(release): 3.1.5
    • a3b3a94 chore: updated node-fetch version to 2.6.7 (#124)
    • efed703 chore: updated node-fetch version to 2.6.5
    • 694ff77 refactor: removed ora from dependencies
    • efc5956 refactor: added .vscode to .gitignore
    • da605d5 refactor: renamed test/fetch/ to test/fetch-api/ and test/module/ to test/mod...
    • 0f0d51d chore: updated minor and patch versions of dev dependencies
    • c6e34ea refactor: removed sinon.js
    • f524a52 fix: yargs was incompatible with node 10
    • 7906fcf chore: updated dev dependencies
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    dependencies 
    opened by dependabot[bot] 2
  • How to set DecisionTreeClassifier reproducibility?

    How to set DecisionTreeClassifier reproducibility?

    Hi, first of all, thanks for developing this library :)

    I was writing a code that use the DecisionTreeClassifier. When I checked my results, I realised that they are not constants. I mean, I set a random number generator with Math.seedrandom(my_seed) to get the same results for each execution, but they are not.

    This method worked for me on LogisticRegression, where the weights are initialized by TensorflowJS (if I am not wrong, the user can "fixs" this initialization using Math.seedrandom() before building the neural network). I know DecisionTreeClassifier is not a neural network, so the random number generation is not equal to LogisticRegression.

    In summary: How can I set a random number generator for getting the same results on a DecisionTreeClassifier?

    opened by alvgoro 2
  • fixing readme example

    fixing readme example

    I believe there was a small error in the documentation (look at how the array was flat in the predict()).

    If I run the code how it was, I receive the following error:

    var _this = _super.call(this, message) || this;
                   ^

ValueError: Error when checking : expected dense_Dense1_input to have shape [null,1] but got array with shape [1,2].
    at new ValueError (.../node_modules/@tensorflow/tfjs-layers/dist/tf-layers.node.js:10080:28)
    at checkInputData (.../node_modules/@tensorflow/tfjs-layers/dist/tf-layers.node.js:19373:31)
    at LayersModel.predict (.../node_modules/@tensorflow/tfjs-layers/dist/tf-layers.node.js:20051:9)
    at Sequential.predict (.../node_modules/@tensorflow/tfjs-layers/dist/tf-layers.node.js:21555:27)
    at LinearRegression.predict (.../dist/node/linear_model/sgdRegressor.js:204:40)
    at main (.../test/mock/basic-node.mjs:10:18)

    So I made the change to what I believe to be the intended way - but let me know if I'm not correct!

    :)

    opened by codeheart09 2
  • chore(deps): bump json5 from 2.2.0 to 2.2.3

    chore(deps): bump json5 from 2.2.0 to 2.2.3

    Bumps json5 from 2.2.0 to 2.2.3.

    Release notes

    Sourced from json5's releases.

    v2.2.3

    v2.2.2

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

    v2.2.1

    • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)
    Changelog

    Sourced from json5's changelog.

    v2.2.3 [code, diff]

    v2.2.2 [code, diff]

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

    v2.2.1 [code, diff]

    • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)
    Commits
    • c3a7524 2.2.3
    • 94fd06d docs: update CHANGELOG for v2.2.3
    • 3b8cebf docs(security): use GitHub security advisories
    • f0fd9e1 docs: publish a security policy
    • 6a91a05 docs(template): bug -> bug report
    • 14f8cb1 2.2.2
    • 10cc7ca docs: update CHANGELOG for v2.2.2
    • 7774c10 fix: add proto to objects and arrays
    • edde30a Readme: slight tweak to intro
    • 97286f8 Improve example in readme
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    dependencies 
    opened by dependabot[bot] 1
  • chore(deps): bump json5 from 1.0.1 to 1.0.2 in /docs

    chore(deps): bump json5 from 1.0.1 to 1.0.2 in /docs

    Bumps json5 from 1.0.1 to 1.0.2.

    Release notes

    Sourced from json5's releases.

    v1.0.2

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295). This has been backported to v1. (#298)
    Changelog

    Sourced from json5's changelog.

    Unreleased [code, diff]

    v2.2.3 [code, diff]

    v2.2.2 [code, diff]

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

    v2.2.1 [code, diff]

    • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)

    v2.2.0 [code, diff]

    • New: Accurate and documented TypeScript declarations are now included. There is no need to install @types/json5. (#236, #244)

    v2.1.3 [code, diff]

    • Fix: An out of memory bug when parsing numbers has been fixed. (#228, #229)

    v2.1.2 [code, diff]

    ... (truncated)

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    dependencies 
    opened by dependabot[bot] 1
  • chore(deps): bump json5 and babel-loader in /docs

    chore(deps): bump json5 and babel-loader in /docs

    Bumps json5 and babel-loader. These dependencies needed to be updated together. Updates json5 from 2.2.0 to 2.2.3

    Release notes

    Sourced from json5's releases.

    v2.2.3

    v2.2.2

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

    v2.2.1

    • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)
    Changelog

    Sourced from json5's changelog.

    v2.2.3 [code, diff]

    v2.2.2 [code, diff]

    • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

    v2.2.1 [code, diff]

    • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)
    Commits
    • c3a7524 2.2.3
    • 94fd06d docs: update CHANGELOG for v2.2.3
    • 3b8cebf docs(security): use GitHub security advisories
    • f0fd9e1 docs: publish a security policy
    • 6a91a05 docs(template): bug -> bug report
    • 14f8cb1 2.2.2
    • 10cc7ca docs: update CHANGELOG for v2.2.2
    • 7774c10 fix: add proto to objects and arrays
    • edde30a Readme: slight tweak to intro
    • 97286f8 Improve example in readme
    • Additional commits viewable in compare view

    Updates babel-loader from 8.2.3 to 8.3.0

    Release notes

    Sourced from babel-loader's releases.

    v8.3.0

    New features

    Full Changelog: https://github.com/babel/babel-loader/compare/v8.2.5...v8.3.0

    v8.2.5

    What's Changed

    New Contributors

    Full Changelog: https://github.com/babel/babel-loader/compare/v8.2.4...v8.2.5

    v8.2.4

    What's Changed

    Thanks @​loveDstyle, @​stianjensen and @​pathmapper for your first PRs!

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    dependencies 
    opened by dependabot[bot] 1
  • chore(deps): bump express from 4.17.1 to 4.18.2 in /docs

    chore(deps): bump express from 4.17.1 to 4.18.2 in /docs

    Bumps express from 4.17.1 to 4.18.2.

    Release notes

    Sourced from express's releases.

    4.18.2

    4.18.1

    • Fix hanging on large stack of sync routes

    4.18.0

    ... (truncated)

    Changelog

    Sourced from express's changelog.

    4.18.2 / 2022-10-08

    4.18.1 / 2022-04-29

    • Fix hanging on large stack of sync routes

    4.18.0 / 2022-04-25

    ... (truncated)

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    dependencies 
    opened by dependabot[bot] 1
  • chore(deps): bump qs from 6.5.2 to 6.5.3

    chore(deps): bump qs from 6.5.2 to 6.5.3

    Bumps qs from 6.5.2 to 6.5.3.

    Changelog

    Sourced from qs's changelog.

    6.5.3

    • [Fix] parse: ignore __proto__ keys (#428)
    • [Fix] utils.merge: avoid a crash with a null target and a truthy non-array source
    • [Fix] correctly parse nested arrays
    • [Fix] stringify: fix a crash with strictNullHandling and a custom filter/serializeDate (#279)
    • [Fix] utils: merge: fix crash when source is a truthy primitive & no options are provided
    • [Fix] when parseArrays is false, properly handle keys ending in []
    • [Fix] fix for an impossible situation: when the formatter is called with a non-string value
    • [Fix] utils.merge: avoid a crash with a null target and an array source
    • [Refactor] utils: reduce observable [[Get]]s
    • [Refactor] use cached Array.isArray
    • [Refactor] stringify: Avoid arr = arr.concat(...), push to the existing instance (#269)
    • [Refactor] parse: only need to reassign the var once
    • [Robustness] stringify: avoid relying on a global undefined (#427)
    • [readme] remove travis badge; add github actions/codecov badges; update URLs
    • [Docs] Clean up license text so it’s properly detected as BSD-3-Clause
    • [Docs] Clarify the need for "arrayLimit" option
    • [meta] fix README.md (#399)
    • [meta] add FUNDING.yml
    • [actions] backport actions from main
    • [Tests] always use String(x) over x.toString()
    • [Tests] remove nonexistent tape option
    • [Dev Deps] backport from main
    Commits
    • 298bfa5 v6.5.3
    • ed0f5dc [Fix] parse: ignore __proto__ keys (#428)
    • 691e739 [Robustness] stringify: avoid relying on a global undefined (#427)
    • 1072d57 [readme] remove travis badge; add github actions/codecov badges; update URLs
    • 12ac1c4 [meta] fix README.md (#399)
    • 0338716 [actions] backport actions from main
    • 5639c20 Clean up license text so it’s properly detected as BSD-3-Clause
    • 51b8a0b add FUNDING.yml
    • 45f6759 [Fix] fix for an impossible situation: when the formatter is called with a no...
    • f814a7f [Dev Deps] backport from main
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    dependencies 
    opened by dependabot[bot] 1
  • chore(deps): bump qs and express in /docs

    chore(deps): bump qs and express in /docs

    Bumps qs and express. These dependencies needed to be updated together. Updates qs from 6.7.0 to 6.11.0

    Changelog

    Sourced from qs's changelog.

    6.11.0

    • [New] [Fix] stringify: revert 0e903c0; add commaRoundTrip option (#442)
    • [readme] fix version badge

    6.10.5

    • [Fix] stringify: with arrayFormat: comma, properly include an explicit [] on a single-item array (#434)

    6.10.4

    • [Fix] stringify: with arrayFormat: comma, include an explicit [] on a single-item array (#441)
    • [meta] use npmignore to autogenerate an npmignore file
    • [Dev Deps] update eslint, @ljharb/eslint-config, aud, has-symbol, object-inspect, tape

    6.10.3

    • [Fix] parse: ignore __proto__ keys (#428)
    • [Robustness] stringify: avoid relying on a global undefined (#427)
    • [actions] reuse common workflows
    • [Dev Deps] update eslint, @ljharb/eslint-config, object-inspect, tape

    6.10.2

    • [Fix] stringify: actually fix cyclic references (#426)
    • [Fix] stringify: avoid encoding arrayformat comma when encodeValuesOnly = true (#424)
    • [readme] remove travis badge; add github actions/codecov badges; update URLs
    • [Docs] add note and links for coercing primitive values (#408)
    • [actions] update codecov uploader
    • [actions] update workflows
    • [Tests] clean up stringify tests slightly
    • [Dev Deps] update eslint, @ljharb/eslint-config, aud, object-inspect, safe-publish-latest, tape

    6.10.1

    • [Fix] stringify: avoid exception on repeated object values (#402)

    6.10.0

    • [New] stringify: throw on cycles, instead of an infinite loop (#395, #394, #393)
    • [New] parse: add allowSparse option for collapsing arrays with missing indices (#312)
    • [meta] fix README.md (#399)
    • [meta] only run npm run dist in publish, not install
    • [Dev Deps] update eslint, @ljharb/eslint-config, aud, has-symbols, tape
    • [Tests] fix tests on node v0.6
    • [Tests] use ljharb/actions/node/install instead of ljharb/actions/node/run
    • [Tests] Revert "[meta] ignore eclint transitive audit warning"

    6.9.7

    • [Fix] parse: ignore __proto__ keys (#428)
    • [Fix] stringify: avoid encoding arrayformat comma when encodeValuesOnly = true (#424)
    • [Robustness] stringify: avoid relying on a global undefined (#427)
    • [readme] remove travis badge; add github actions/codecov badges; update URLs
    • [Docs] add note and links for coercing primitive values (#408)
    • [Tests] clean up stringify tests slightly
    • [meta] fix README.md (#399)
    • Revert "[meta] ignore eclint transitive audit warning"

    ... (truncated)

    Commits
    • 56763c1 v6.11.0
    • ddd3e29 [readme] fix version badge
    • c313472 [New] [Fix] stringify: revert 0e903c0; add commaRoundTrip option
    • 95bc018 v6.10.5
    • 0e903c0 [Fix] stringify: with arrayFormat: comma, properly include an explicit `[...
    • ba9703c v6.10.4
    • 4e44019 [Fix] stringify: with arrayFormat: comma, include an explicit [] on a s...
    • 113b990 [Dev Deps] update object-inspect
    • c77f38f [Dev Deps] update eslint, @ljharb/eslint-config, aud, has-symbol, tape
    • 2cf45b2 [meta] use npmignore to autogenerate an npmignore file
    • Additional commits viewable in compare view

    Updates express from 4.17.1 to 4.18.2

    Release notes

    Sourced from express's releases.

    4.18.2

    4.18.1

    • Fix hanging on large stack of sync routes

    4.18.0

    ... (truncated)

    Changelog

    Sourced from express's changelog.

    4.18.2 / 2022-10-08

    4.18.1 / 2022-04-29

    • Fix hanging on large stack of sync routes

    4.18.0 / 2022-04-25

    ... (truncated)

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    dependencies 
    opened by dependabot[bot] 1
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Building JavaScript tools for Data Science, Machine Learning and Deep Learning.
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